org.biojava.bio.seq.io

Class FeatureTableParser

java.lang.Object

org.biojava.bio.seq.io.FeatureTableParser

Deprecated.

Use org.biojavax.bio.seq.io framework instead

public class FeatureTableParser
extends Object

Simple parser for feature tables. This is shared between the EMBL and GENBANK format readers.

Author:

Thomas Down, Matthew Pocock, Greg Cox, Keith James

Method Summary

Methods

Modifier and Type	Method and Description
void	endFeature() Deprecated.
void	featureData(String line) Deprecated.
boolean	inFeature() Deprecated.
void	setSeqID(String seqID) Deprecated.
void	startFeature(String type) Deprecated.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Detail

setSeqID

public void setSeqID(String seqID)

Deprecated.

startFeature

public void startFeature(String type)
                  throws BioException

Deprecated.

Throws:

BioException

featureData

public void featureData(String line)
                 throws BioException

Deprecated.

Throws:

BioException

endFeature

public void endFeature()
                throws BioException

Deprecated.

Throws:

BioException

inFeature

public boolean inFeature()

Deprecated.