AlignmentFormat (biojava-legacy 1.9.5 API)

All Known Implementing Classes:

FastaAlignmentFormat, MSFAlignmentFormat
```
public interface AlignmentFormat
```
Author:

Matthew Pocock, Samiul Hasan, Thomas Down, Keith James

- Method Summary
  
  All Methods Instance Methods Abstract Methods
  Modifier and Type Method Description
  
  Alignment read(java.io.BufferedReader reader)
  Read in an alignment from a buffered reader object

- Method Detail
  - read
```
Alignment read(java.io.BufferedReader reader)
```
    Read in an alignment from a buffered reader object
    
    Parameters:
    
    reader - the reader from which to read in the alignment