Uses of Class
org.biojava.nbio.structure.io.mmcif.model.AtomSite
Packages that use AtomSite
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Uses of AtomSite in org.biojava.nbio.structure.io.mmcif
Methods in org.biojava.nbio.structure.io.mmcif that return AtomSiteModifier and TypeMethodDescriptionstatic AtomSiteMMCIFFileTools.convertAtomToAtomSite(Atom a, int model, String chainName, String chainId) Converts an Atom object to anAtomSiteobject.static AtomSiteMMCIFFileTools.convertAtomToAtomSite(Atom a, int model, String chainName, String chainId, int atomId) Converts an Atom object to anAtomSiteobject.Methods in org.biojava.nbio.structure.io.mmcif that return types with arguments of type AtomSiteModifier and TypeMethodDescriptionMMCIFFileTools.convertChainToAtomSites(Chain c, int model, String chainName, String chainId) Converts a Chain into a List ofAtomSiteobjectsMMCIFFileTools.convertGroupToAtomSites(Group g, int model, String chainName, String chainId) Converts a Group into a List ofAtomSiteobjects.MMCIFFileTools.convertStructureToAtomSites(Structure s) Converts a Structure into a List ofAtomSiteobjectsMethods in org.biojava.nbio.structure.io.mmcif with parameters of type AtomSiteModifier and TypeMethodDescriptionvoidChemCompConsumer.newAtomSite(AtomSite atom) voidMetalBondConsumer.newAtomSite(AtomSite atom) voidMMcifConsumer.newAtomSite(AtomSite atom) A new AtomSite record has been read.voidSimpleMMcifConsumer.newAtomSite(AtomSite atom)