Gnumed.pycommon.gmMatchProvider API documentation
Description: Base classes for match providers …

# Module `Gnumed.pycommon.gmMatchProvider`

Base classes for match providers.

They are used by business objects to give phrasewheels the ability to guess phrases.

Copyright (C) GNUMed developers license: GPL v2 or later

Expand source code

    """Base classes for match providers.

    They are used by business objects to give
    phrasewheels the ability to guess phrases.

    Copyright (C) GNUMed developers
    license: GPL v2 or later
    """
    __author__  = "K.Hilbert <Karsten.Hilbert@gmx.net>, I.Haywood <ihaywood@gnu.org>, S.J.Tan <sjtan@bigpond.com>"

    # std lib
    import sys
    import logging
    import re as regex
    import datetime as pydt

    # GNUmed
    if __name__ == "__main__":
            sys.path.insert(0, '../../')
    from Gnumed.pycommon import gmPG2

    _log = logging.getLogger('gm.ui')

    # these are stripped from the fragment passed to the
    # match provider before looking for matches:
    default_ignored_chars = "[?!.'\\(){}\[\]<>~#*$%^_]+" + '"'

    # these are used to detect word boundaries which is,
    # in turn, used to normalize word boundaries in the
    # input fragment
    default_word_separators = '[- \t=+&:@]+'
    #============================================================
    class cMatchProvider(object):
            """Base class for match providing objects.

            Match sources might be:
            - database tables
            - flat files
            - previous input
            - config files
            - in-memory list created on the fly
            """
            print_queries = False
            #--------------------------------------------------------
            def __init__(self):
                    self.setThresholds()

                    self._context_vals = {}
                    self.__ignored_chars = regex.compile(default_ignored_chars)
                    # used to normalize word boundaries:
                    self.__word_separators = regex.compile(default_word_separators)
            #--------------------------------------------------------
            # actions
            #--------------------------------------------------------
            def getMatches(self, aFragment = None):
                    """Return matches according to aFragment and matching thresholds.

                    FIXME: design decision: we dont worry about data source changes
                               during the lifetime of a MatchProvider
                    FIXME: append _("*get all items*") on truncation
                    """
                    # sanity check
                    if aFragment is None:
                            raise ValueError('Cannot find matches without a fragment.')

                    # user explicitly wants all matches
                    if aFragment == '*':
                            return self.getAllMatches()

                    # case insensitivity
                    tmpFragment = aFragment.casefold()
                    # remove ignored chars
                    if self.__ignored_chars is not None:
                            tmpFragment = self.__ignored_chars.sub('', tmpFragment)
                    # normalize word separators
                    if self.__word_separators is not None:
                            tmpFragment = ' '.join(self.__word_separators.split(tmpFragment))
                    # length in number of significant characters only
                    lngFragment = len(tmpFragment)

                    # order is important !
                    if lngFragment >= self.__threshold_substring:
                            return self.getMatchesBySubstr(tmpFragment)
                    elif lngFragment >= self.__threshold_word:
                            return self.getMatchesByWord(tmpFragment)
                    elif lngFragment >= self.__threshold_phrase:
                            return self.getMatchesByPhrase(tmpFragment)
                    else:
                            return (False, [])
            #--------------------------------------------------------
            def getAllMatches(self):
                    raise NotImplementedError
            #--------------------------------------------------------
            def getMatchesByPhrase(self, aFragment):
                    raise NotImplementedError
            #--------------------------------------------------------
            def getMatchesByWord(self, aFragment):
                    raise NotImplementedError
            #--------------------------------------------------------
            def getMatchesBySubstr(self, aFragment):
                    raise NotImplementedError
            #--------------------------------------------------------
            def get_match_by_data(self, data=None):
                    return None
            #--------------------------------------------------------
            # configuration
            #--------------------------------------------------------
            def setThresholds(self, aPhrase = 1, aWord = 3, aSubstring = 5):
                    """Set match location thresholds.

                    - the fragment passed to getMatches() must contain at least this many
                      characters before it triggers a match search at:
                      1) phrase_start - start of phrase (first word)
                      2) word_start - start of any word within phrase
                      3) in_word - _inside_ any word within phrase
                    """
                    # sanity checks
                    if aSubstring < aWord:
                            _log.error('Setting substring threshold (%s) lower than word-start threshold (%s) does not make sense. Retaining original thresholds (%s:%s, respectively).' % (aSubstring, aWord, self.__threshold_substring, self.__threshold_word))
                            return False
                    if aWord < aPhrase:
                            _log.error('Setting word-start threshold (%s) lower than phrase-start threshold (%s) does not make sense. Retaining original thresholds (%s:%s, respectively).' % (aSubstring, aWord, self.__threshold_word, self.__threshold_phrase))
                            return False

                    # now actually reassign thresholds
                    self.__threshold_phrase = aPhrase
                    self.__threshold_word   = aWord
                    self.__threshold_substring      = aSubstring

                    return True
            #--------------------------------------------------------
            def _set_word_separators(self, word_separators=None):
                    if word_separators is None:
                            self.__word_separators = None
                    else:
                            self.__word_separators = regex.compile(word_separators)

            def _get_word_separators(self):
                    if self.__word_separators is None:
                            return None
                    return self.__word_separators.pattern

            word_separators = property(_get_word_separators, _set_word_separators)
            #--------------------------------------------------------
            def _set_ignored_chars(self, ignored_chars=None):
                    if ignored_chars is None:
                            self.__ignored_chars = None
                    else:
                            self.__ignored_chars = regex.compile(ignored_chars)

            def _get_ignored_chars(self):
                    if self.__ignored_chars is None:
                            return None
                    return self.__ignored_chars.pattern

            ignored_chars = property(_get_ignored_chars, _set_ignored_chars)
            #--------------------------------------------------------
            def set_context (self, context=None, val=None):
                    """Set value to provide context information     for matches.

                    The matching code may ignore it depending on its exact
                    implementation. Names and values of the context depend
                    on what is being matched.

                    <context> -- the *placeholder* key *inside* the context
                                             definition, not the context *definition* key
                    """
                    if context is None:
                            return False
                    self._context_vals[context] = val
                    return True
            #--------------------------------------------------------
            def unset_context(self, context=None):
                    try:
                            del self._context_vals[context]
                    except KeyError:
                            pass
    #------------------------------------------------------------
    # usable instances
    #------------------------------------------------------------
    class cMatchProvider_FixedList(cMatchProvider):
            """Match provider where all possible options can be held
               in a reasonably sized, pre-allocated list.
            """
            def __init__(self, aSeq = None):
                    """aSeq must be a list of dicts. Each dict must have the keys (data, label, weight)
                    """
                    if not type(aSeq) in [type(None), list, tuple]:
                            _log.error('fixed list match provider argument must be a list/tuple of dicts/None')
                            raise TypeError('fixed list match provider argument must be a list/tuple of dicts/None')

                    self.__items = aSeq
                    cMatchProvider.__init__(self)

            #--------------------------------------------------------
            # internal matching algorithms
            #
            # if we end up here:
            #       - aFragment will not be "None"
            #   - aFragment will be lower case
            #       - we _do_ deliver matches (whether we find any is a different story)
            #--------------------------------------------------------
            def getMatchesByPhrase(self, aFragment):
                    """Return matches for aFragment at start of phrases."""
                    matches = []
                    # look for matches
                    for item in self.__items:
                            # at start of phrase, that is
                            if item['list_label'].casefold().startswith(aFragment.casefold()):
                                    matches.append(item)
                    # no matches found
                    if len(matches) == 0:
                            return (False, [])

                    #matches.sort(self.__cmp_items)
                    matches.sort(key = lambda x: x['weight'], reverse = True)
                    return (True, matches)

            #--------------------------------------------------------
            def getMatchesByWord(self, aFragment):
                    """Return matches for aFragment at start of words inside phrases."""
                    matches = []
                    # look for matches
                    for item in self.__items:
                            item_label = item['list_label'].casefold()
                            fragment_pos = item_label.find(aFragment.casefold())
                            # found at start of phrase
                            if fragment_pos == 0:
                                    matches.append(item)
                            # found as a true substring
                            elif fragment_pos > 0:
                                    # but use only if substring is at start of a word
                                    if item_label[fragment_pos-1] == ' ':
                                            matches.append(item)
                    # no matches found
                    if len(matches) == 0:
                            return (False, [])

                    #matches.sort(self.__cmp_items)
                    matches.sort(key = lambda x: x['weight'], reverse = True)
                    return (True, matches)

            #--------------------------------------------------------
            def getMatchesBySubstr(self, aFragment):
                    """Return matches for aFragment as a true substring."""
                    matches = []
                    # look for matches
                    for item in self.__items:
                            if item['list_label'].casefold().find(aFragment.casefold()) != -1:
                                    matches.append(item)
                    # no matches found
                    if len(matches) == 0:
                            return (False, [])

                    #matches.sort(self.__cmp_items)
                    matches.sort(key = lambda x: x['weight'], reverse = True)
                    return (True, matches)

            #--------------------------------------------------------
            def getAllMatches(self):
                    """Return all items."""
                    matches = self.__items
                    # no matches found
                    if len(matches) == 0:
                            return (False, [])

                    #matches.sort(self.__cmp_items)
                    matches.sort(key = lambda x: x['weight'], reverse = True)
                    return (True, matches)

            #--------------------------------------------------------
            def set_items(self, items):
                    """items must be a list of dicts. Each dict must have the keys (data, list_label, weight)"""
                    self.__items = items

    #       #--------------------------------------------------------
    #       def __cmp_items(self, item1, item2):
    #               """Compare items based on weight."""
    #               if item1['weight'] == item2['weight']:
    #                       return 0
    #
    #               # do it the wrong way round to do sorting/reversing at once
    #               if item1['weight'] < item2['weight']:
    #                       return 1
    #               if item1['weight'] > item2['weight']:
    #                       return -1

    # ===========================================================
    class cMatchProvider_Func(cMatchProvider):
            """Match provider which searches matches
               in the results of a function call.
            """
            def __init__(self, get_candidates = None):
                    """get_candidates() must return a list of strings."""
                    if get_candidates is None:
                            _log.error('must define function to retrieve match candidates list')
                            raise ValueError('must define function to retrieve match candidates list')

                    self._get_candidates = get_candidates
                    cMatchProvider.__init__(self)
            #--------------------------------------------------------
            # internal matching algorithms
            #
            # if we end up here:
            #       - aFragment will not be "None"
            #   - aFragment will be lower case
            #       - we _do_ deliver matches (whether we find any is a different story)
            #--------------------------------------------------------
            def getMatchesByPhrase(self, aFragment):
                    """Return matches for aFragment at start of phrases."""
                    matches = []
                    candidates = self._get_candidates()
                    # look for matches
                    for candidate in candidates:
                            # at start of phrase, that is
                            if aFragment.startswith(candidate['list_label'].casefold()):
                                    matches.append(candidate)
                    # no matches found
                    if len(matches) == 0:
                            return (False, [])

                    matches.sort(key = self.__cmp_candidates)
                    return (True, matches)
            #--------------------------------------------------------
            def getMatchesByWord(self, aFragment):
                    """Return matches for aFragment at start of words inside phrases."""
                    matches = []
                    candidates = self._get_candidates()
                    # look for matches
                    for candidate in candidates:
                            pos = candidate['list_label'].casefold().find(aFragment)
    #                       pos = string.find(string.lower(candidate['list_label']), aFragment)
                            # found as a true substring
                            # but use only if substring is at start of a word
                            # FIXME: use word seps
                            if (pos == 0) or (candidate['list_label'][pos-1] == ' '):
                                    matches.append(candidate)
                    # no matches found
                    if len(matches) == 0:
                            return (False, [])

                    matches.sort(key = self.__cmp_candidates)
                    return (True, matches)
            #--------------------------------------------------------
            def getMatchesBySubstr(self, aFragment):
                    """Return matches for aFragment as a true substring."""
                    matches = []
                    candidates = self._get_candidates()
                    # look for matches
                    for candidate in candidates:
                            if candidate['list_label'].casefold().find(aFragment) != -1:
    #                       if string.find(string.lower(candidate['list_label']), aFragment) != -1:
                                    matches.append(candidate)
                    # no matches found
                    if len(matches) == 0:
                            return (False, [])

                    matches.sort(key = self.__cmp_candidates)
                    return (True, matches)
            #--------------------------------------------------------
            def getAllMatches(self):
                    """Return all candidates."""
                    return self._get_candidates()
            #--------------------------------------------------------
            #def __cmp_candidates(self, candidate1, candidate2):
            def __cmp_candidates(self, candidate):
                    """naive ordering"""
                    return 0
                    # FIXME: do ordering
    #               if candidate1 < candidate2:
    #                       return -1
    #               if candidate1 == candidate2:
    #                       return 0
    #               return 1

    # ===========================================================
    class cMatchProvider_SQL2(cMatchProvider):
            """Match provider which searches matches
               in possibly several database tables.

            queries:
                    - a list of unicode strings
                    - each string is a query
                    - each string must contain: "... WHERE <column> %(fragment_condition)s ..."
                    - each string can contain in the where clause: "... %(<ctxt_key1>)s ..."
                    - each query must return (data, list_label, field_label)

            context definitions to be used in the queries, example:
                    {'ctxt_key1': {'where_part': 'AND country = %(country)s', 'placeholder': 'country'}}

            client code using .set_context() must use the 'placeholder':
                    <phrasewheel>/<match provider>.set_context('country', 'Germany')

            full example query:

                    query = u" " "
                            SELECT DISTINCT ON (list_label)
                                    pk_encounter
                                            AS data,
                                    to_char(started, 'YYYY Mon DD (HH24:MI)') || ': ' || l10n_type || ' [#' || pk_encounter || ']'
                                            AS list_label,
                                    to_char(started, 'YYYY Mon DD') || ': ' || l10n_type
                                            AS field_label
                            FROM
                                    clin.v_pat_encounters
                            WHERE
                                    (
                                            l10n_type %(fragment_condition)s
                                                    OR
                                            type %(fragment_condition)s
                                    )       %(ctxt_patient)s
                            ORDER BY
                                    list_label
                            LIMIT
                                    30
                    " " "
                    context = {'ctxt_patient': {
                            'where_part': u'AND pk_patient = %(PLACEHOLDER)s',
                            'placeholder': u'PLACEHOLDER'
                    }}
                    self.mp = gmMatchProvider.cMatchProvider_SQL2(queries = query, context = context)
                    self.set_context(context = 'PLACEHOLDER', val = '<THE VALUE>')

            _SQL_data2match:
                    SQL to retrieve a match by, say, primary key
                    wherein the only keyword argument is 'pk'
            """
            def __init__(self, queries = None, context = None):

                    cMatchProvider.__init__(self)

                    if type(queries) == type([]):
                            self._queries = queries
                    else:
                            self._queries = [queries]

                    if context is None:
                            self._context = {}
                    else:
                            self._context = context

                    self._args = {}

                    self._SQL_data2match = None

            #--------------------------------------------------------
            # internal matching algorithms
            #
            # if we end up here:
            #       - aFragment will not be "None"
            #   - aFragment will be lower case
            #       - we _do_ deliver matches (whether we find any is a different story)
            #--------------------------------------------------------
            def getMatchesByPhrase(self, aFragment):
                    """Return matches for aFragment at start of phrases."""

                    fragment_condition = "ILIKE %(fragment)s"
                    self._args['fragment'] = "%s%%" % aFragment

                    return self._find_matches(fragment_condition)

            #--------------------------------------------------------
            def getMatchesByWord(self, aFragment):
                    """Return matches for aFragment at start of words inside phrases."""

                    fragment_condition = "~* %(fragment)s"
                    aFragment = gmPG2.sanitize_pg_regex(expression = aFragment, escape_all = False)
                    self._args['fragment'] = "( %s)|(^%s)" % (aFragment, aFragment)

                    return self._find_matches(fragment_condition)

            #--------------------------------------------------------
            def getMatchesBySubstr(self, aFragment):
                    """Return matches for aFragment as a true substring."""

                    fragment_condition = "ILIKE %(fragment)s"
                    self._args['fragment'] = "%%%s%%" % aFragment

                    return self._find_matches(fragment_condition)

            #--------------------------------------------------------
            def getAllMatches(self):
                    """Return all items."""
                    return self.getMatchesBySubstr('')

            #--------------------------------------------------------
            def get_match_by_data(self, data=None):
                    if self._SQL_data2match is None:
                            return None

                    query = {'cmd': self._SQL_data2match, 'args': {'pk': data}}
                    try:
                            rows, idx = gmPG2.run_ro_queries(queries = [query], get_col_idx = False)
                    except Exception:
                            _log.exception('[%s]: error running _SQL_data2match, dropping query', self.__class__.__name__)
                            self._SQL_data2match = None
                            return None

                    # hopefully the most frequent case:
                    if len(rows) == 1:
                            return rows[0]

                    _log.error('[%s]: 0 or >1 rows found by running _SQL_data2match, ambiguous, ignoring', self.__class__.__name__)
                    return None

            #--------------------------------------------------------
            def _rows2matches(self, rows):
                    """Turns retrieved database values into a list
                       of dicts fit for phrasewheel use.

                       This method can be overridden to massage arbitrary
                       data into the proper list of dicts.
                    """
                    matches = []
                    for row in rows:
                            # PRW wants a weight
                            match = {'weight': 0}
                            try:
                                    match['data'] = row['data']
                            except KeyError:
                                    match['data'] = row[0]
                            try:
                                    match['list_label'] = row['list_label']
                            except KeyError:
                                    match['list_label'] = row[1]
                            # explicit "field_label" in result ?
                            try:
                                    match['field_label'] = row['field_label']
                            # no
                            except KeyError:
                                    # but does row[2] exist ?
                                    try:
                                            match['field_label'] = row[2]
                                    # no: reuse "list_label"
                                    except IndexError:
                                            match['field_label'] = match['list_label']
                            matches.append(match)

                    return matches

            #--------------------------------------------------------
            def _find_matches(self, fragment_condition):
                    """Loads matching data from PostgreSQL and turns them into
                       matches fit for consumption by a phrasewheel.
                    """
                    if self.print_queries:
                            print("----------------------")
                            print(pydt.datetime.now())

                    matches = []
                    for query in self._queries:
                            where_fragments = {'fragment_condition': fragment_condition}

                            for context_key, context_def in self._context.items():
                                    try:
                                            placeholder = context_def['placeholder']
                                            where_part = context_def['where_part']
                                            self._args[placeholder] = self._context_vals[placeholder]
                                            # we do have a context value for this key, so add the where condition
                                            where_fragments[context_key] = where_part
                                            if self.print_queries:
                                                    print("ctxt ph:", placeholder)
                                                    print("ctxt where:", where_part)
                                                    print("ctxt val:", self._context_vals[placeholder])
                                    except KeyError:
                                            # we don't have a context value for this key, so skip the where condition
                                            where_fragments[context_key] = ''
                                            if self.print_queries:
                                                    print("invalid ctxt key:", context_key)

                            cmd = query % where_fragments

                            if self.print_queries:
                                    print("class:", self.__class__.__name__)
                                    print("ctxt:", self._context_vals)
                                    print("args:", self._args)
                                    print("query:", cmd)

                            try:
                                    rows, idx = gmPG2.run_ro_queries(queries = [{'cmd': cmd, 'args': self._args}], get_col_idx = False)
                            except gmPG2.PG_ERROR_EXCEPTION:
                                    _log.exception('[%s]: error running match provider SQL, dropping query', self.__class__.__name__)
                                    idx = self._queries.index(query)
                                    del self._queries[idx]
                                    break
                            # no matches found: try next query
                            if len(rows) == 0:
                                    continue
                            matches = self._rows2matches(rows)
                            return (True, matches)
                    # none found whatsoever
                    return (False, [])

    #================================================================
    if __name__ == '__main__':
            pass

## Classes

`class cMatchProvider`

  Base class for match providing objects.

  Match sources might be: - database tables - flat files - previous input - config files - in-memory list created on the fly

  Expand source code

      class cMatchProvider(object):
              """Base class for match providing objects.

              Match sources might be:
              - database tables
              - flat files
              - previous input
              - config files
              - in-memory list created on the fly
              """
              print_queries = False
              #--------------------------------------------------------
              def __init__(self):
                      self.setThresholds()

                      self._context_vals = {}
                      self.__ignored_chars = regex.compile(default_ignored_chars)
                      # used to normalize word boundaries:
                      self.__word_separators = regex.compile(default_word_separators)
              #--------------------------------------------------------
              # actions
              #--------------------------------------------------------
              def getMatches(self, aFragment = None):
                      """Return matches according to aFragment and matching thresholds.

                      FIXME: design decision: we dont worry about data source changes
                                 during the lifetime of a MatchProvider
                      FIXME: append _("*get all items*") on truncation
                      """
                      # sanity check
                      if aFragment is None:
                              raise ValueError('Cannot find matches without a fragment.')

                      # user explicitly wants all matches
                      if aFragment == '*':
                              return self.getAllMatches()

                      # case insensitivity
                      tmpFragment = aFragment.casefold()
                      # remove ignored chars
                      if self.__ignored_chars is not None:
                              tmpFragment = self.__ignored_chars.sub('', tmpFragment)
                      # normalize word separators
                      if self.__word_separators is not None:
                              tmpFragment = ' '.join(self.__word_separators.split(tmpFragment))
                      # length in number of significant characters only
                      lngFragment = len(tmpFragment)

                      # order is important !
                      if lngFragment >= self.__threshold_substring:
                              return self.getMatchesBySubstr(tmpFragment)
                      elif lngFragment >= self.__threshold_word:
                              return self.getMatchesByWord(tmpFragment)
                      elif lngFragment >= self.__threshold_phrase:
                              return self.getMatchesByPhrase(tmpFragment)
                      else:
                              return (False, [])
              #--------------------------------------------------------
              def getAllMatches(self):
                      raise NotImplementedError
              #--------------------------------------------------------
              def getMatchesByPhrase(self, aFragment):
                      raise NotImplementedError
              #--------------------------------------------------------
              def getMatchesByWord(self, aFragment):
                      raise NotImplementedError
              #--------------------------------------------------------
              def getMatchesBySubstr(self, aFragment):
                      raise NotImplementedError
              #--------------------------------------------------------
              def get_match_by_data(self, data=None):
                      return None
              #--------------------------------------------------------
              # configuration
              #--------------------------------------------------------
              def setThresholds(self, aPhrase = 1, aWord = 3, aSubstring = 5):
                      """Set match location thresholds.

                      - the fragment passed to getMatches() must contain at least this many
                        characters before it triggers a match search at:
                        1) phrase_start - start of phrase (first word)
                        2) word_start - start of any word within phrase
                        3) in_word - _inside_ any word within phrase
                      """
                      # sanity checks
                      if aSubstring < aWord:
                              _log.error('Setting substring threshold (%s) lower than word-start threshold (%s) does not make sense. Retaining original thresholds (%s:%s, respectively).' % (aSubstring, aWord, self.__threshold_substring, self.__threshold_word))
                              return False
                      if aWord < aPhrase:
                              _log.error('Setting word-start threshold (%s) lower than phrase-start threshold (%s) does not make sense. Retaining original thresholds (%s:%s, respectively).' % (aSubstring, aWord, self.__threshold_word, self.__threshold_phrase))
                              return False

                      # now actually reassign thresholds
                      self.__threshold_phrase = aPhrase
                      self.__threshold_word   = aWord
                      self.__threshold_substring      = aSubstring

                      return True
              #--------------------------------------------------------
              def _set_word_separators(self, word_separators=None):
                      if word_separators is None:
                              self.__word_separators = None
                      else:
                              self.__word_separators = regex.compile(word_separators)

              def _get_word_separators(self):
                      if self.__word_separators is None:
                              return None
                      return self.__word_separators.pattern

              word_separators = property(_get_word_separators, _set_word_separators)
              #--------------------------------------------------------
              def _set_ignored_chars(self, ignored_chars=None):
                      if ignored_chars is None:
                              self.__ignored_chars = None
                      else:
                              self.__ignored_chars = regex.compile(ignored_chars)

              def _get_ignored_chars(self):
                      if self.__ignored_chars is None:
                              return None
                      return self.__ignored_chars.pattern

              ignored_chars = property(_get_ignored_chars, _set_ignored_chars)
              #--------------------------------------------------------
              def set_context (self, context=None, val=None):
                      """Set value to provide context information     for matches.

                      The matching code may ignore it depending on its exact
                      implementation. Names and values of the context depend
                      on what is being matched.

                      <context> -- the *placeholder* key *inside* the context
                                               definition, not the context *definition* key
                      """
                      if context is None:
                              return False
                      self._context_vals[context] = val
                      return True
              #--------------------------------------------------------
              def unset_context(self, context=None):
                      try:
                              del self._context_vals[context]
                      except KeyError:
                              pass

  ### Subclasses

  - cMatchProvider_FixedList
  - cMatchProvider_Func
  - cMatchProvider_SQL2

  ### Class variables

  `var print_queries`

  ### Instance variables

  `var ignored_chars`
    Expand source code

        def _get_ignored_chars(self):
                if self.__ignored_chars is None:
                        return None
                return self.__ignored_chars.pattern

  `var word_separators`
    Expand source code

        def _get_word_separators(self):
                if self.__word_separators is None:
                        return None
                return self.__word_separators.pattern

  ### Methods

  `def getAllMatches(self)`
    Expand source code

        def getAllMatches(self):
                raise NotImplementedError

  `def getMatches(self, aFragment=None)`

    Return matches according to aFragment and matching thresholds.

    FIXME: design decision: we dont worry about data source changes during the lifetime of a MatchProvider FIXME: append _("get all items") on truncation

    Expand source code

        def getMatches(self, aFragment = None):
                """Return matches according to aFragment and matching thresholds.

                FIXME: design decision: we dont worry about data source changes
                           during the lifetime of a MatchProvider
                FIXME: append _("*get all items*") on truncation
                """
                # sanity check
                if aFragment is None:
                        raise ValueError('Cannot find matches without a fragment.')

                # user explicitly wants all matches
                if aFragment == '*':
                        return self.getAllMatches()

                # case insensitivity
                tmpFragment = aFragment.casefold()
                # remove ignored chars
                if self.__ignored_chars is not None:
                        tmpFragment = self.__ignored_chars.sub('', tmpFragment)
                # normalize word separators
                if self.__word_separators is not None:
                        tmpFragment = ' '.join(self.__word_separators.split(tmpFragment))
                # length in number of significant characters only
                lngFragment = len(tmpFragment)

                # order is important !
                if lngFragment >= self.__threshold_substring:
                        return self.getMatchesBySubstr(tmpFragment)
                elif lngFragment >= self.__threshold_word:
                        return self.getMatchesByWord(tmpFragment)
                elif lngFragment >= self.__threshold_phrase:
                        return self.getMatchesByPhrase(tmpFragment)
                else:
                        return (False, [])

  `def getMatchesByPhrase(self, aFragment)`
    Expand source code

        def getMatchesByPhrase(self, aFragment):
                raise NotImplementedError

  `def getMatchesBySubstr(self, aFragment)`
    Expand source code

        def getMatchesBySubstr(self, aFragment):
                raise NotImplementedError

  `def getMatchesByWord(self, aFragment)`
    Expand source code

        def getMatchesByWord(self, aFragment):
                raise NotImplementedError

  `def get_match_by_data(self, data=None)`
    Expand source code

        def get_match_by_data(self, data=None):
                return None

  `def setThresholds(self, aPhrase=1, aWord=3, aSubstring=5)`

    Set match location thresholds.

    - the fragment passed to getMatches() must contain at least this many characters before it triggers a match search at: 1) phrase_start - start of phrase (first word) 2) word_start - start of any word within phrase 3) in_word - inside any word within phrase
    Expand source code

        def setThresholds(self, aPhrase = 1, aWord = 3, aSubstring = 5):
                """Set match location thresholds.

                - the fragment passed to getMatches() must contain at least this many
                  characters before it triggers a match search at:
                  1) phrase_start - start of phrase (first word)
                  2) word_start - start of any word within phrase
                  3) in_word - _inside_ any word within phrase
                """
                # sanity checks
                if aSubstring < aWord:
                        _log.error('Setting substring threshold (%s) lower than word-start threshold (%s) does not make sense. Retaining original thresholds (%s:%s, respectively).' % (aSubstring, aWord, self.__threshold_substring, self.__threshold_word))
                        return False
                if aWord < aPhrase:
                        _log.error('Setting word-start threshold (%s) lower than phrase-start threshold (%s) does not make sense. Retaining original thresholds (%s:%s, respectively).' % (aSubstring, aWord, self.__threshold_word, self.__threshold_phrase))
                        return False

                # now actually reassign thresholds
                self.__threshold_phrase = aPhrase
                self.__threshold_word   = aWord
                self.__threshold_substring      = aSubstring

                return True

  `def set_context(self, context=None, val=None)`

    Set value to provide context information for matches.

    The matching code may ignore it depending on its exact implementation. Names and values of the context depend on what is being matched.

    – the placeholder key inside the context definition, not the context definition key

    Expand source code

        def set_context (self, context=None, val=None):
                """Set value to provide context information     for matches.

                The matching code may ignore it depending on its exact
                implementation. Names and values of the context depend
                on what is being matched.

                <context> -- the *placeholder* key *inside* the context
                                         definition, not the context *definition* key
                """
                if context is None:
                        return False
                self._context_vals[context] = val
                return True

  `def unset_context(self, context=None)`
    Expand source code

        def unset_context(self, context=None):
                try:
                        del self._context_vals[context]
                except KeyError:
                        pass

`class cMatchProvider_FixedList (aSeq=None)`

  Match provider where all possible options can be held in a reasonably sized, pre-allocated list.

  aSeq must be a list of dicts. Each dict must have the keys (data, label, weight)

  Expand source code

      class cMatchProvider_FixedList(cMatchProvider):
              """Match provider where all possible options can be held
                 in a reasonably sized, pre-allocated list.
              """
              def __init__(self, aSeq = None):
                      """aSeq must be a list of dicts. Each dict must have the keys (data, label, weight)
                      """
                      if not type(aSeq) in [type(None), list, tuple]:
                              _log.error('fixed list match provider argument must be a list/tuple of dicts/None')
                              raise TypeError('fixed list match provider argument must be a list/tuple of dicts/None')

                      self.__items = aSeq
                      cMatchProvider.__init__(self)

              #--------------------------------------------------------
              # internal matching algorithms
              #
              # if we end up here:
              #       - aFragment will not be "None"
              #   - aFragment will be lower case
              #       - we _do_ deliver matches (whether we find any is a different story)
              #--------------------------------------------------------
              def getMatchesByPhrase(self, aFragment):
                      """Return matches for aFragment at start of phrases."""
                      matches = []
                      # look for matches
                      for item in self.__items:
                              # at start of phrase, that is
                              if item['list_label'].casefold().startswith(aFragment.casefold()):
                                      matches.append(item)
                      # no matches found
                      if len(matches) == 0:
                              return (False, [])

                      #matches.sort(self.__cmp_items)
                      matches.sort(key = lambda x: x['weight'], reverse = True)
                      return (True, matches)

              #--------------------------------------------------------
              def getMatchesByWord(self, aFragment):
                      """Return matches for aFragment at start of words inside phrases."""
                      matches = []
                      # look for matches
                      for item in self.__items:
                              item_label = item['list_label'].casefold()
                              fragment_pos = item_label.find(aFragment.casefold())
                              # found at start of phrase
                              if fragment_pos == 0:
                                      matches.append(item)
                              # found as a true substring
                              elif fragment_pos > 0:
                                      # but use only if substring is at start of a word
                                      if item_label[fragment_pos-1] == ' ':
                                              matches.append(item)
                      # no matches found
                      if len(matches) == 0:
                              return (False, [])

                      #matches.sort(self.__cmp_items)
                      matches.sort(key = lambda x: x['weight'], reverse = True)
                      return (True, matches)

              #--------------------------------------------------------
              def getMatchesBySubstr(self, aFragment):
                      """Return matches for aFragment as a true substring."""
                      matches = []
                      # look for matches
                      for item in self.__items:
                              if item['list_label'].casefold().find(aFragment.casefold()) != -1:
                                      matches.append(item)
                      # no matches found
                      if len(matches) == 0:
                              return (False, [])

                      #matches.sort(self.__cmp_items)
                      matches.sort(key = lambda x: x['weight'], reverse = True)
                      return (True, matches)

              #--------------------------------------------------------
              def getAllMatches(self):
                      """Return all items."""
                      matches = self.__items
                      # no matches found
                      if len(matches) == 0:
                              return (False, [])

                      #matches.sort(self.__cmp_items)
                      matches.sort(key = lambda x: x['weight'], reverse = True)
                      return (True, matches)

              #--------------------------------------------------------
              def set_items(self, items):
                      """items must be a list of dicts. Each dict must have the keys (data, list_label, weight)"""
                      self.__items = items

  ### Ancestors

  - cMatchProvider

  ### Methods

  `def getAllMatches(self)`

    Return all items.

    Expand source code

        def getAllMatches(self):
                """Return all items."""
                matches = self.__items
                # no matches found
                if len(matches) == 0:
                        return (False, [])

                #matches.sort(self.__cmp_items)
                matches.sort(key = lambda x: x['weight'], reverse = True)
                return (True, matches)

  `def getMatchesByPhrase(self, aFragment)`

    Return matches for aFragment at start of phrases.

    Expand source code

        def getMatchesByPhrase(self, aFragment):
                """Return matches for aFragment at start of phrases."""
                matches = []
                # look for matches
                for item in self.__items:
                        # at start of phrase, that is
                        if item['list_label'].casefold().startswith(aFragment.casefold()):
                                matches.append(item)
                # no matches found
                if len(matches) == 0:
                        return (False, [])

                #matches.sort(self.__cmp_items)
                matches.sort(key = lambda x: x['weight'], reverse = True)
                return (True, matches)

  `def getMatchesBySubstr(self, aFragment)`

    Return matches for aFragment as a true substring.

    Expand source code

        def getMatchesBySubstr(self, aFragment):
                """Return matches for aFragment as a true substring."""
                matches = []
                # look for matches
                for item in self.__items:
                        if item['list_label'].casefold().find(aFragment.casefold()) != -1:
                                matches.append(item)
                # no matches found
                if len(matches) == 0:
                        return (False, [])

                #matches.sort(self.__cmp_items)
                matches.sort(key = lambda x: x['weight'], reverse = True)
                return (True, matches)

  `def getMatchesByWord(self, aFragment)`

    Return matches for aFragment at start of words inside phrases.

    Expand source code

        def getMatchesByWord(self, aFragment):
                """Return matches for aFragment at start of words inside phrases."""
                matches = []
                # look for matches
                for item in self.__items:
                        item_label = item['list_label'].casefold()
                        fragment_pos = item_label.find(aFragment.casefold())
                        # found at start of phrase
                        if fragment_pos == 0:
                                matches.append(item)
                        # found as a true substring
                        elif fragment_pos > 0:
                                # but use only if substring is at start of a word
                                if item_label[fragment_pos-1] == ' ':
                                        matches.append(item)
                # no matches found
                if len(matches) == 0:
                        return (False, [])

                #matches.sort(self.__cmp_items)
                matches.sort(key = lambda x: x['weight'], reverse = True)
                return (True, matches)

  `def set_items(self, items)`

    items must be a list of dicts. Each dict must have the keys (data, list_label, weight)

    Expand source code

        def set_items(self, items):
                """items must be a list of dicts. Each dict must have the keys (data, list_label, weight)"""
                self.__items = items

  ### Inherited members

  - `cMatchProvider`:
    - `getMatches`
    - `setThresholds`
    - `set_context`
`class cMatchProvider_Func (get_candidates=None)`

  Match provider which searches matches in the results of a function call.

  get_candidates() must return a list of strings.

  Expand source code

      class cMatchProvider_Func(cMatchProvider):
              """Match provider which searches matches
                 in the results of a function call.
              """
              def __init__(self, get_candidates = None):
                      """get_candidates() must return a list of strings."""
                      if get_candidates is None:
                              _log.error('must define function to retrieve match candidates list')
                              raise ValueError('must define function to retrieve match candidates list')

                      self._get_candidates = get_candidates
                      cMatchProvider.__init__(self)
              #--------------------------------------------------------
              # internal matching algorithms
              #
              # if we end up here:
              #       - aFragment will not be "None"
              #   - aFragment will be lower case
              #       - we _do_ deliver matches (whether we find any is a different story)
              #--------------------------------------------------------
              def getMatchesByPhrase(self, aFragment):
                      """Return matches for aFragment at start of phrases."""
                      matches = []
                      candidates = self._get_candidates()
                      # look for matches
                      for candidate in candidates:
                              # at start of phrase, that is
                              if aFragment.startswith(candidate['list_label'].casefold()):
                                      matches.append(candidate)
                      # no matches found
                      if len(matches) == 0:
                              return (False, [])

                      matches.sort(key = self.__cmp_candidates)
                      return (True, matches)
              #--------------------------------------------------------
              def getMatchesByWord(self, aFragment):
                      """Return matches for aFragment at start of words inside phrases."""
                      matches = []
                      candidates = self._get_candidates()
                      # look for matches
                      for candidate in candidates:
                              pos = candidate['list_label'].casefold().find(aFragment)
      #                       pos = string.find(string.lower(candidate['list_label']), aFragment)
                              # found as a true substring
                              # but use only if substring is at start of a word
                              # FIXME: use word seps
                              if (pos == 0) or (candidate['list_label'][pos-1] == ' '):
                                      matches.append(candidate)
                      # no matches found
                      if len(matches) == 0:
                              return (False, [])

                      matches.sort(key = self.__cmp_candidates)
                      return (True, matches)
              #--------------------------------------------------------
              def getMatchesBySubstr(self, aFragment):
                      """Return matches for aFragment as a true substring."""
                      matches = []
                      candidates = self._get_candidates()
                      # look for matches
                      for candidate in candidates:
                              if candidate['list_label'].casefold().find(aFragment) != -1:
      #                       if string.find(string.lower(candidate['list_label']), aFragment) != -1:
                                      matches.append(candidate)
                      # no matches found
                      if len(matches) == 0:
                              return (False, [])

                      matches.sort(key = self.__cmp_candidates)
                      return (True, matches)
              #--------------------------------------------------------
              def getAllMatches(self):
                      """Return all candidates."""
                      return self._get_candidates()
              #--------------------------------------------------------
              #def __cmp_candidates(self, candidate1, candidate2):
              def __cmp_candidates(self, candidate):
                      """naive ordering"""
                      return 0
                      # FIXME: do ordering

  ### Ancestors

  - cMatchProvider

  ### Methods

  `def getAllMatches(self)`

    Return all candidates.

    Expand source code

        def getAllMatches(self):
                """Return all candidates."""
                return self._get_candidates()

  `def getMatchesByPhrase(self, aFragment)`

    Return matches for aFragment at start of phrases.

    Expand source code

        def getMatchesByPhrase(self, aFragment):
                """Return matches for aFragment at start of phrases."""
                matches = []
                candidates = self._get_candidates()
                # look for matches
                for candidate in candidates:
                        # at start of phrase, that is
                        if aFragment.startswith(candidate['list_label'].casefold()):
                                matches.append(candidate)
                # no matches found
                if len(matches) == 0:
                        return (False, [])

                matches.sort(key = self.__cmp_candidates)
                return (True, matches)

  `def getMatchesBySubstr(self, aFragment)`

    Return matches for aFragment as a true substring.

    Expand source code

                def getMatchesBySubstr(self, aFragment):
                        """Return matches for aFragment as a true substring."""
                        matches = []
                        candidates = self._get_candidates()
                        # look for matches
                        for candidate in candidates:
                                if candidate['list_label'].casefold().find(aFragment) != -1:
        #                       if string.find(string.lower(candidate['list_label']), aFragment) != -1:
                                        matches.append(candidate)
                        # no matches found
                        if len(matches) == 0:
                                return (False, [])

                        matches.sort(key = self.__cmp_candidates)
                        return (True, matches)

  `def getMatchesByWord(self, aFragment)`

    Return matches for aFragment at start of words inside phrases.

    Expand source code

                def getMatchesByWord(self, aFragment):
                        """Return matches for aFragment at start of words inside phrases."""
                        matches = []
                        candidates = self._get_candidates()
                        # look for matches
                        for candidate in candidates:
                                pos = candidate['list_label'].casefold().find(aFragment)
        #                       pos = string.find(string.lower(candidate['list_label']), aFragment)
                                # found as a true substring
                                # but use only if substring is at start of a word
                                # FIXME: use word seps
                                if (pos == 0) or (candidate['list_label'][pos-1] == ' '):
                                        matches.append(candidate)
                        # no matches found
                        if len(matches) == 0:
                                return (False, [])

                        matches.sort(key = self.__cmp_candidates)
                        return (True, matches)

  ### Inherited members

  - `cMatchProvider`:
    - `getMatches`
    - `setThresholds`
    - `set_context`
`class cMatchProvider_SQL2 (queries=None, context=None)`

  Match provider which searches matches in possibly several database tables.

  queries: - a list of unicode strings - each string is a query - each string must contain: "… WHERE %(fragment_condition)s …" - each string can contain in the where clause: "… %()s …" - each query must return (data, list_label, field_label)

  context definitions to be used in the queries, example: {'ctxt_key1': {'where_part': 'AND country = %(country)s', 'placeholder': 'country'}}

  client code using .set_context() must use the 'placeholder': /.set_context('country', 'Germany')

  full example query:

          query = u" " "
                  SELECT DISTINCT ON (list_label)
                          pk_encounter
                                  AS data,
                          to_char(started, 'YYYY Mon DD (HH24:MI)') || ': ' || l10n_type || ' [#' || pk_encounter || ']'
                                  AS list_label,
                          to_char(started, 'YYYY Mon DD') || ': ' || l10n_type
                                  AS field_label
                  FROM
                          clin.v_pat_encounters
                  WHERE
                          (
                                  l10n_type %(fragment_condition)s
                                          OR
                                  type %(fragment_condition)s
                          )       %(ctxt_patient)s
                  ORDER BY
                          list_label
                  LIMIT
                          30
          " " "
          context = {'ctxt_patient': {
                  'where_part': u'AND pk_patient = %(PLACEHOLDER)s',
                  'placeholder': u'PLACEHOLDER'
          }}
          self.mp = gmMatchProvider.cMatchProvider_SQL2(queries = query, context = context)
          self.set_context(context = 'PLACEHOLDER', val = '<THE VALUE>')

  _SQL_data2match: SQL to retrieve a match by, say, primary key wherein the only keyword argument is 'pk'

  Expand source code

      class cMatchProvider_SQL2(cMatchProvider):
              """Match provider which searches matches
                 in possibly several database tables.

              queries:
                      - a list of unicode strings
                      - each string is a query
                      - each string must contain: "... WHERE <column> %(fragment_condition)s ..."
                      - each string can contain in the where clause: "... %(<ctxt_key1>)s ..."
                      - each query must return (data, list_label, field_label)

              context definitions to be used in the queries, example:
                      {'ctxt_key1': {'where_part': 'AND country = %(country)s', 'placeholder': 'country'}}

              client code using .set_context() must use the 'placeholder':
                      <phrasewheel>/<match provider>.set_context('country', 'Germany')

              full example query:

                      query = u" " "
                              SELECT DISTINCT ON (list_label)
                                      pk_encounter
                                              AS data,
                                      to_char(started, 'YYYY Mon DD (HH24:MI)') || ': ' || l10n_type || ' [#' || pk_encounter || ']'
                                              AS list_label,
                                      to_char(started, 'YYYY Mon DD') || ': ' || l10n_type
                                              AS field_label
                              FROM
                                      clin.v_pat_encounters
                              WHERE
                                      (
                                              l10n_type %(fragment_condition)s
                                                      OR
                                              type %(fragment_condition)s
                                      )       %(ctxt_patient)s
                              ORDER BY
                                      list_label
                              LIMIT
                                      30
                      " " "
                      context = {'ctxt_patient': {
                              'where_part': u'AND pk_patient = %(PLACEHOLDER)s',
                              'placeholder': u'PLACEHOLDER'
                      }}
                      self.mp = gmMatchProvider.cMatchProvider_SQL2(queries = query, context = context)
                      self.set_context(context = 'PLACEHOLDER', val = '<THE VALUE>')

              _SQL_data2match:
                      SQL to retrieve a match by, say, primary key
                      wherein the only keyword argument is 'pk'
              """
              def __init__(self, queries = None, context = None):

                      cMatchProvider.__init__(self)

                      if type(queries) == type([]):
                              self._queries = queries
                      else:
                              self._queries = [queries]

                      if context is None:
                              self._context = {}
                      else:
                              self._context = context

                      self._args = {}

                      self._SQL_data2match = None

              #--------------------------------------------------------
              # internal matching algorithms
              #
              # if we end up here:
              #       - aFragment will not be "None"
              #   - aFragment will be lower case
              #       - we _do_ deliver matches (whether we find any is a different story)
              #--------------------------------------------------------
              def getMatchesByPhrase(self, aFragment):
                      """Return matches for aFragment at start of phrases."""

                      fragment_condition = "ILIKE %(fragment)s"
                      self._args['fragment'] = "%s%%" % aFragment

                      return self._find_matches(fragment_condition)

              #--------------------------------------------------------
              def getMatchesByWord(self, aFragment):
                      """Return matches for aFragment at start of words inside phrases."""

                      fragment_condition = "~* %(fragment)s"
                      aFragment = gmPG2.sanitize_pg_regex(expression = aFragment, escape_all = False)
                      self._args['fragment'] = "( %s)|(^%s)" % (aFragment, aFragment)

                      return self._find_matches(fragment_condition)

              #--------------------------------------------------------
              def getMatchesBySubstr(self, aFragment):
                      """Return matches for aFragment as a true substring."""

                      fragment_condition = "ILIKE %(fragment)s"
                      self._args['fragment'] = "%%%s%%" % aFragment

                      return self._find_matches(fragment_condition)

              #--------------------------------------------------------
              def getAllMatches(self):
                      """Return all items."""
                      return self.getMatchesBySubstr('')

              #--------------------------------------------------------
              def get_match_by_data(self, data=None):
                      if self._SQL_data2match is None:
                              return None

                      query = {'cmd': self._SQL_data2match, 'args': {'pk': data}}
                      try:
                              rows, idx = gmPG2.run_ro_queries(queries = [query], get_col_idx = False)
                      except Exception:
                              _log.exception('[%s]: error running _SQL_data2match, dropping query', self.__class__.__name__)
                              self._SQL_data2match = None
                              return None

                      # hopefully the most frequent case:
                      if len(rows) == 1:
                              return rows[0]

                      _log.error('[%s]: 0 or >1 rows found by running _SQL_data2match, ambiguous, ignoring', self.__class__.__name__)
                      return None

              #--------------------------------------------------------
              def _rows2matches(self, rows):
                      """Turns retrieved database values into a list
                         of dicts fit for phrasewheel use.

                         This method can be overridden to massage arbitrary
                         data into the proper list of dicts.
                      """
                      matches = []
                      for row in rows:
                              # PRW wants a weight
                              match = {'weight': 0}
                              try:
                                      match['data'] = row['data']
                              except KeyError:
                                      match['data'] = row[0]
                              try:
                                      match['list_label'] = row['list_label']
                              except KeyError:
                                      match['list_label'] = row[1]
                              # explicit "field_label" in result ?
                              try:
                                      match['field_label'] = row['field_label']
                              # no
                              except KeyError:
                                      # but does row[2] exist ?
                                      try:
                                              match['field_label'] = row[2]
                                      # no: reuse "list_label"
                                      except IndexError:
                                              match['field_label'] = match['list_label']
                              matches.append(match)

                      return matches

              #--------------------------------------------------------
              def _find_matches(self, fragment_condition):
                      """Loads matching data from PostgreSQL and turns them into
                         matches fit for consumption by a phrasewheel.
                      """
                      if self.print_queries:
                              print("----------------------")
                              print(pydt.datetime.now())

                      matches = []
                      for query in self._queries:
                              where_fragments = {'fragment_condition': fragment_condition}

                              for context_key, context_def in self._context.items():
                                      try:
                                              placeholder = context_def['placeholder']
                                              where_part = context_def['where_part']
                                              self._args[placeholder] = self._context_vals[placeholder]
                                              # we do have a context value for this key, so add the where condition
                                              where_fragments[context_key] = where_part
                                              if self.print_queries:
                                                      print("ctxt ph:", placeholder)
                                                      print("ctxt where:", where_part)
                                                      print("ctxt val:", self._context_vals[placeholder])
                                      except KeyError:
                                              # we don't have a context value for this key, so skip the where condition
                                              where_fragments[context_key] = ''
                                              if self.print_queries:
                                                      print("invalid ctxt key:", context_key)

                              cmd = query % where_fragments

                              if self.print_queries:
                                      print("class:", self.__class__.__name__)
                                      print("ctxt:", self._context_vals)
                                      print("args:", self._args)
                                      print("query:", cmd)

                              try:
                                      rows, idx = gmPG2.run_ro_queries(queries = [{'cmd': cmd, 'args': self._args}], get_col_idx = False)
                              except gmPG2.PG_ERROR_EXCEPTION:
                                      _log.exception('[%s]: error running match provider SQL, dropping query', self.__class__.__name__)
                                      idx = self._queries.index(query)
                                      del self._queries[idx]
                                      break
                              # no matches found: try next query
                              if len(rows) == 0:
                                      continue
                              matches = self._rows2matches(rows)
                              return (True, matches)
                      # none found whatsoever
                      return (False, [])

  ### Ancestors

  - cMatchProvider

  ### Subclasses

  - cEpisodeMatchProvider
  - cFormTemplateNameLong_MatchProvider
  - cFormTemplateNameShort_MatchProvider
  - cFormTemplateType_MatchProvider
  - cLOINCMatchProvider
  - cDrugComponentMatchProvider
  - cProductOrSubstanceMatchProvider
  - cSubstanceDoseMatchProvider
  - cSubstanceIntakeObjectMatchProvider
  - cMatchProvider_Provider

  ### Methods

  `def getAllMatches(self)`

    Return all items.

    Expand source code

        def getAllMatches(self):
                """Return all items."""
                return self.getMatchesBySubstr('')

  `def getMatchesByPhrase(self, aFragment)`

    Return matches for aFragment at start of phrases.

    Expand source code

        def getMatchesByPhrase(self, aFragment):
                """Return matches for aFragment at start of phrases."""

                fragment_condition = "ILIKE %(fragment)s"
                self._args['fragment'] = "%s%%" % aFragment

                return self._find_matches(fragment_condition)

  `def getMatchesBySubstr(self, aFragment)`

    Return matches for aFragment as a true substring.

    Expand source code

        def getMatchesBySubstr(self, aFragment):
                """Return matches for aFragment as a true substring."""

                fragment_condition = "ILIKE %(fragment)s"
                self._args['fragment'] = "%%%s%%" % aFragment

                return self._find_matches(fragment_condition)

  `def getMatchesByWord(self, aFragment)`

    Return matches for aFragment at start of words inside phrases.

    Expand source code

        def getMatchesByWord(self, aFragment):
                """Return matches for aFragment at start of words inside phrases."""

                fragment_condition = "~* %(fragment)s"
                aFragment = gmPG2.sanitize_pg_regex(expression = aFragment, escape_all = False)
                self._args['fragment'] = "( %s)|(^%s)" % (aFragment, aFragment)

                return self._find_matches(fragment_condition)

  `def get_match_by_data(self, data=None)`
    Expand source code

        def get_match_by_data(self, data=None):
                if self._SQL_data2match is None:
                        return None

                query = {'cmd': self._SQL_data2match, 'args': {'pk': data}}
                try:
                        rows, idx = gmPG2.run_ro_queries(queries = [query], get_col_idx = False)
                except Exception:
                        _log.exception('[%s]: error running _SQL_data2match, dropping query', self.__class__.__name__)
                        self._SQL_data2match = None
                        return None

                # hopefully the most frequent case:
                if len(rows) == 1:
                        return rows[0]

                _log.error('[%s]: 0 or >1 rows found by running _SQL_data2match, ambiguous, ignoring', self.__class__.__name__)
                return None

  ### Inherited members

  - `cMatchProvider`:
    - `getMatches`
    - `setThresholds`
    - `set_context`